Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5547

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5545: 13913 - Hypothetical Protein, at 342333 to 343433 13913 mRNA_5546: 13914 - Hypothetical Protein, at 343568 to 344161 13914 mRNA_5547: 13915 - K08994 yneE putative membrane protein, at 344428 to 346193 13915 mRNA_5548: 13916 - KOG4006 Anti-proliferation factor BTG1/TOB, at 346631 to 348391 13916

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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343,583 - 0.1
343,619 - -0.2
343,725 + 13914 mRNA_5546 0.26 0.3
343,754 - 13914 mRNA_5546 0.31 -0.9
343,801 + 13914 mRNA_5546 0.39 -0.6
343,803 + 13914 mRNA_5546 0.40 0.1
343,827 + 13914 mRNA_5546 0.44 0.2
343,873 - 13914 mRNA_5546 0.51 1.5
343,904 - 13914 mRNA_5546 0.57 -3.5
343,911 + 13914 mRNA_5546 0.58 -1.0
343,930 - 13914 mRNA_5546 0.61 0.5
343,966 - 13914 mRNA_5546 0.67 2.7
343,989 - 13914 mRNA_5546 0.71 -0.3
344,105 - -0.4
344,134 + -0.1
344,259 + 1.4
344,398 + 0.6
344,474 - -2.6
344,842 + 13915 mRNA_5547 0.23 0.7
345,121 - 13915 mRNA_5547 0.39 -0.2
345,147 - 13915 mRNA_5547 0.41 1.4
345,583 - 13915 mRNA_5547 0.65 1.2
345,869 + 13915 mRNA_5547 0.82 0.2
345,924 - 13915 mRNA_5547 0.85 -0.9
346,758 + -0.3
346,759 + 1.3
346,872 + 13916 mRNA_5548 0.14 0.3