Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5516

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5515: 13883 - K02738 PSMB6 20S proteasome subunit beta 1, at 275180 to 276108 13883 mRNA_5516: 13884 - Hypothetical Protein, at 276264 to 277474 13884

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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276,177 - -0.5
276,177 - 0.8
276,199 + 2.0
276,230 - 0.7
276,331 + 1.5
276,361 - 2.1
276,382 - 2.6
276,639 + 13884 mRNA_5516 0.31 -1.3
276,906 - 13884 mRNA_5516 0.53 0.3
276,912 - 13884 mRNA_5516 0.54 2.1
276,920 + 13884 mRNA_5516 0.54 0.1
277,142 + 13884 mRNA_5516 0.73 -0.5
277,210 + 13884 mRNA_5516 0.78 0.0
277,233 - 13884 mRNA_5516 0.80 0.4
277,357 + -2.1
277,492 + 0.3
277,514 - 3.2
277,775 - 1.9
277,933 - 0.3
278,228 + 1.1
278,232 + -0.8
278,342 + -0.2
278,352 + 1.0
278,379 - -0.4