Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5508

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5508: 13876 - KOG0297 TNF receptor-associated factor, at 262441 to 263588 13876 mRNA_5509: 13877 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 264045 to 264907 13877

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
261,517 - -1.9
261,525 + -0.3
261,546 + 1.2
261,564 + 1.5
261,653 - -0.3
261,828 - -0.1
262,128 - -0.3
262,548 + 0.5
262,710 - 13876 mRNA_5508 0.23 -0.0
262,723 + 13876 mRNA_5508 0.25 1.0
262,806 + 13876 mRNA_5508 0.32 1.7
262,895 - 13876 mRNA_5508 0.40 -0.2
263,365 - 13876 mRNA_5508 0.80 2.1
263,445 - 13876 mRNA_5508 0.87 -0.3
263,578 - -0.9
263,579 + -2.3
263,582 - 0.1
263,689 - -1.5
263,708 - -1.3
263,718 - 1.4
263,727 - -0.1
263,732 + 2.4
263,732 + 2.9
263,736 - -0.4
263,749 + 0.3
263,844 + -1.4
263,878 + 0.7
264,436 - 13877 mRNA_5509 0.45 1.1
264,473 + 13877 mRNA_5509 0.50 -0.3