Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5505

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5504: 13872 - KOG4034 Uncharacterized conserved protein NOF (Neighbor of FAU), at 253512 to 254101 13872 mRNA_5505: 13873 - KOG0297 TNF receptor-associated factor, at 254457 to 255755 13873

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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253,457 + 0.6
254,147 + 0.3
254,163 + 0.0
254,176 - -0.2
254,401 + 0.8
254,645 - 13873 mRNA_5505 0.14 -0.6
254,646 + 13873 mRNA_5505 0.15 1.5
254,755 - 13873 mRNA_5505 0.23 -0.7
254,894 - 13873 mRNA_5505 0.34 2.5
254,896 - 13873 mRNA_5505 0.34 0.2
255,024 - 13873 mRNA_5505 0.44 -1.0
255,036 - 13873 mRNA_5505 0.45 -0.1
255,251 + 13873 mRNA_5505 0.61 1.5
255,642 + 3.6
255,658 + -0.4
255,918 - 2.2
256,070 - 0.2
256,090 + 1.8
256,098 - 1.8
256,117 + -1.1
256,212 - 0.3
256,222 - 0.3
256,236 - 1.1
256,360 + -0.3
256,530 + -1.0