Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5503

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5503: 13871 - HMMPfam-Chitin synthase III catalytic subunit-PF12271, at 251563 to 253057 13871 mRNA_5504: 13872 - KOG4034 Uncharacterized conserved protein NOF (Neighbor of FAU), at 253512 to 254101 13872

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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250,604 - 0.8
250,606 + -0.3
250,641 - 1.6
250,739 - 0.6
250,766 + 0.3
250,893 - 1.6
250,894 + 1.1
250,896 + 0.7
250,900 - -1.9
250,902 - -0.6
250,918 + 0.9
250,943 + 0.0
251,012 - -0.5
251,078 - 0.7
251,290 + 3.1
251,387 - 0.1
251,395 - -1.4
251,397 - 0.4
251,408 + 0.5
251,556 - 1.8
251,571 + 0.2
251,575 + -0.8
251,583 + -0.7
251,736 - 13871 mRNA_5503 0.12 0.3
252,268 - 13871 mRNA_5503 0.47 -0.1
252,419 - 13871 mRNA_5503 0.57 0.8
253,110 + -0.2
253,113 - 0.8
253,155 - 1.2
253,228 + 0.4
253,457 + 0.6