Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5489

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5488: 13856 - K01078 E3.1.3.2 acid phosphatase, at 214884 to 216932 13856 mRNA_5489: 13857 - KOG1263 Multicopper oxidases, at 217387 to 219494 13857 mRNA_5490: 13858 - Hypothetical Protein, at 219614 to 220900 13858

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
216,564 - 13856 mRNA_5488 0.82 0.8
216,982 - 2.3
216,997 - -0.6
217,002 + -0.3
217,147 + 0.3
217,150 + 0.7
217,152 - 1.1
217,275 - -0.3
217,298 + -0.5
217,300 + 0.4
217,317 - 1.4
217,613 - 13857 mRNA_5489 0.11 0.2
217,651 + 13857 mRNA_5489 0.13 0.7
217,672 - 13857 mRNA_5489 0.14 -0.1
217,769 + 13857 mRNA_5489 0.18 -0.7
217,922 - 13857 mRNA_5489 0.25 -1.7
217,923 + 13857 mRNA_5489 0.25 0.8
218,092 - 13857 mRNA_5489 0.33 1.0
218,300 - 13857 mRNA_5489 0.43 0.5
218,730 - 13857 mRNA_5489 0.64 -2.0
218,770 + 13857 mRNA_5489 0.66 -0.5
219,190 + 13857 mRNA_5489 0.86 -0.1
219,208 + 13857 mRNA_5489 0.86 -0.2
219,534 - -1.6
219,652 - -0.4
219,704 - 0.6
219,883 + 13858 mRNA_5490 0.21 1.4
220,139 + 13858 mRNA_5490 0.41 0.4
220,274 + 13858 mRNA_5490 0.51 -0.1
220,298 + 13858 mRNA_5490 0.53 0.8
220,301 - 13858 mRNA_5490 0.53 -0.7
220,408 - 13858 mRNA_5490 0.62 0.4