Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5481

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5480: 13848 - Hypothetical Protein, at 198378 to 198864 13848 mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199332 to 200672 13849 mRNA_5482: 13850 - Hypothetical Protein, at 201045 to 202061 13850

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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198,358 - -1.8
198,636 + 13848 mRNA_5480 0.53 0.8
198,651 + 13848 mRNA_5480 0.56 0.6
198,698 - 13848 mRNA_5480 0.66 0.7
198,782 - 13848 mRNA_5480 0.83 -0.7
198,788 - 13848 mRNA_5480 0.84 1.6
198,797 - 13848 mRNA_5480 0.86 1.0
198,811 - 13848 mRNA_5480 0.89 0.7
198,989 + -0.1
199,095 + 0.4
199,335 - 2.1
199,392 + 0.0
199,480 + 13849 mRNA_5481 0.11 2.6
199,514 - 13849 mRNA_5481 0.14 1.3
199,644 - 13849 mRNA_5481 0.23 2.2
199,684 - 13849 mRNA_5481 0.26 0.2
199,812 + 13849 mRNA_5481 0.36 0.1
199,916 - 13849 mRNA_5481 0.44 2.5
200,071 - 13849 mRNA_5481 0.55 0.4
200,156 + 13849 mRNA_5481 0.61 2.2
200,237 - 13849 mRNA_5481 0.67 -1.1
200,240 + 13849 mRNA_5481 0.68 -1.2
200,559 - -0.3
200,770 + -0.6
201,004 - 2.0
201,244 + 13850 mRNA_5482 0.20 -0.5
201,247 - 13850 mRNA_5482 0.20 1.1