Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5477

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5476: 13844 - KOG4719 Nuclear pore complex protein, at 183800 to 188314 13844 mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188584 to 192714 13845 mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192866 to 194409 13846

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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188,366 + 1.5
188,373 + -0.5
188,390 - -2.1
188,512 - 0.9
188,521 + 2.1
188,794 - -0.3
189,613 - 13845 mRNA_5477 0.25 -1.0
190,270 - 13845 mRNA_5477 0.41 1.3
192,339 + 0.1
192,752 - -0.9
192,792 - 2.3
192,795 - 0.7
192,796 + 1.2
192,800 + 0.2
192,816 - -0.4
192,822 + -0.8
192,823 + 0.7
192,957 - 1.1
192,962 + 0.9