Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5460

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5459: 13827 - K11274 WDHD1, CTF4 chromosome transmission fidelity protein 4, at 137712 to 142307 13827 mRNA_5460: 13828 - Hypothetical Protein, at 142761 to 144304 13828 mRNA_5461: 13829 - KOG1721 FOG Zn-finger, at 144867 to 148106 13829

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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142,477 + -0.4
142,482 + 0.6
142,486 + 0.0
142,658 + -0.4
142,678 + -1.3
142,801 + 3.0
143,078 + 13828 mRNA_5460 0.21 0.1
143,528 + 13828 mRNA_5460 0.50 0.1
143,807 - 13828 mRNA_5460 0.68 0.3
143,902 - 13828 mRNA_5460 0.74 1.2
144,828 - 1.3
144,832 - 0.5
144,939 + 0.6
145,112 - -0.4
145,132 - 0.1
145,133 + 0.1
145,301 - 13829 mRNA_5461 0.13 -1.6