Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5459

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5458: 13826 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 135775 to 137466 13826 mRNA_5459: 13827 - K11274 WDHD1, CTF4 chromosome transmission fidelity protein 4, at 137712 to 142307 13827 mRNA_5460: 13828 - Hypothetical Protein, at 142761 to 144304 13828

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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137,584 + -0.2
137,642 - 1.5
137,645 + 0.8
137,694 + 2.4
137,719 + 1.5
138,231 + 13827 mRNA_5459 0.11 -2.1
138,381 + 13827 mRNA_5459 0.15 1.0
138,669 + 13827 mRNA_5459 0.21 1.2
138,823 - 13827 mRNA_5459 0.24 1.0
139,157 - 13827 mRNA_5459 0.31 1.3
142,477 + -0.4
142,482 + 0.6
142,486 + 0.0
142,658 + -0.4
142,678 + -1.3
142,801 + 3.0
143,078 + 13828 mRNA_5460 0.21 0.1