Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5456

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5455: 13823 - PRINTS-Proline rich extensin signature-PR01217, at 127817 to 128320 13823 mRNA_5456: 13824 - K07034 K07034 uncharacterized protein, at 129299 to 130839 13824

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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128,340 - 0.5
128,478 + 0.6
128,507 - -1.9
128,517 + 1.2
128,533 + 0.3
128,553 + -0.1
128,612 - -0.5
128,622 + -0.5
128,625 + 1.7
128,629 + 0.6
128,635 - -0.1
128,640 - 3.8
128,666 + 0.3
128,681 - -0.9
128,682 - 0.6
128,696 - 0.4
128,709 - -0.3
128,716 - 1.0
128,717 + -0.4
128,732 - -0.0
128,769 + 0.1
128,773 + 0.2
128,789 + 0.1
128,799 - -0.8
128,800 + 1.9
128,801 - 0.7
128,802 + -0.4
128,813 + 0.1
128,813 + 1.6
128,823 + 1.5
128,842 - 0.4
128,852 - 0.9
128,859 + 0.8
128,860 + 2.4
128,863 - 0.9
128,870 - 1.1
128,873 + 0.4
128,876 + 0.2
128,890 - -0.1
128,895 - -0.6
128,904 + -2.6
128,996 - 1.2
129,001 + -0.2
129,025 + -0.4
129,031 + 0.2
129,036 + -0.5
129,051 - -0.1
129,053 - 1.0
129,055 + 1.5
129,058 + -0.3
129,064 - -0.1
129,064 + 1.4
129,067 + 1.2
129,074 + 0.4
129,092 + 3.0
129,101 - -0.2
129,102 - 0.4
129,103 - 0.2
129,106 + -0.0
129,116 + 1.3
129,117 - 0.2
129,120 + 0.7
129,160 - 0.0
129,176 - 0.8
129,189 + -0.5
129,192 + 0.6
129,219 - -0.3
129,220 - 0.1
129,221 + -1.4
129,222 - 0.0
129,223 - -0.3
129,225 + -0.9
129,230 - 0.4
129,231 + -0.1
129,232 - 0.6
129,237 + 0.1
129,239 + 0.8
129,242 - 0.6
129,249 - -0.7
129,390 + 3.5
129,396 - 0.2
129,419 + 0.3
129,427 + 0.4
129,535 + 13824 mRNA_5456 0.15 -0.9
129,545 - 13824 mRNA_5456 0.16 2.4
129,609 + 13824 mRNA_5456 0.20 1.1
129,680 - 13824 mRNA_5456 0.25 2.2
129,719 - 13824 mRNA_5456 0.27 -0.1
130,319 - 13824 mRNA_5456 0.66 -0.1
130,404 - 13824 mRNA_5456 0.72 1.0
131,152 - -0.2
131,182 + 2.3
131,208 - 0.9
131,212 + 2.2
131,312 - 0.8
131,320 + -1.3
131,338 + -0.0
131,375 + 0.4
131,397 - 0.1
131,495 + 0.1
131,520 + 1.4