Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5430

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5429: 13797 - K01067 E3.1.2.1, ACH1 acetyl-CoA hydrolase, at 79557 to 82396 13797 mRNA_5430: 13798 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 82627 to 84263 13798 mRNA_5431: 13799 - KOG1296 Uncharacterized conserved protein, at 84428 to 85305 13799

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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81,845 + 13797 mRNA_5429 0.81 1.1
82,398 - 1.3
82,409 + 1.2
82,583 - -0.1
82,583 + 0.4
82,883 - 13798 mRNA_5430 0.16 1.1
82,902 - 13798 mRNA_5430 0.17 -2.7
82,970 - 13798 mRNA_5430 0.21 2.4
83,012 - 13798 mRNA_5430 0.24 -1.3
83,433 - 13798 mRNA_5430 0.49 1.7
83,441 - 13798 mRNA_5430 0.50 -0.0
83,598 - 13798 mRNA_5430 0.59 1.2
84,171 - -0.4
84,300 - 1.5
84,305 + 1.4
84,459 - -0.3
84,932 - 13799 mRNA_5431 0.57 0.9
84,970 + 13799 mRNA_5431 0.62 0.3
85,068 - 13799 mRNA_5431 0.73 -0.9
85,069 - 13799 mRNA_5431 0.73 0.9
85,154 + 13799 mRNA_5431 0.83 -0.9
85,188 - 13799 mRNA_5431 0.87 3.4