Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5415

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5415: 13783 - HMMPfam-Tyrosyl-DNA phosphodiesterase-PF06087,SUPERFAMILY--SSF56024, at 48943 to 50652 13783

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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48,073 + 0.5
48,165 - 0.1
48,654 - -2.1
48,833 - 3.0
49,268 - 13783 mRNA_5415 0.19 1.8
49,277 - 13783 mRNA_5415 0.20 -0.9
49,284 + 13783 mRNA_5415 0.20 0.0
49,500 + 13783 mRNA_5415 0.33 1.5
49,530 - 13783 mRNA_5415 0.34 -0.9
49,674 - 13783 mRNA_5415 0.43 1.9
49,763 - 13783 mRNA_5415 0.48 -1.5
49,763 - 13783 mRNA_5415 0.48 -1.0
50,181 - 13783 mRNA_5415 0.72 -0.2
50,358 - 13783 mRNA_5415 0.83 0.4
50,442 - 13783 mRNA_5415 0.88 0.2
50,461 + 13783 mRNA_5415 0.89 -1.2
50,568 - 2.0
50,587 + -0.1
50,626 + 0.7
50,753 + -0.3
50,753 + -1.3
50,771 + -0.6
50,773 + -1.2
50,774 - -1.4
50,775 - 0.3
50,894 - -0.1
50,897 - -0.2
50,901 - 0.7
50,908 + 2.5
50,924 + -0.7