Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5393

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5393: 13761 - KOG0603 Ribosomal protein S6 kinase, at 640505 to 641434 13761

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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639,654 + 0.4
639,778 - -1.3
639,809 + 0.6
639,844 - -0.9
639,889 - 0.4
639,922 + -0.8
639,964 - -0.2
640,009 - -0.2
640,092 - 2.2
640,184 + 0.6
640,231 + 1.0
640,243 - -0.4
640,251 - -0.3
640,251 + -0.5
640,379 - -0.6
640,386 + 0.6
640,390 - 0.3
640,393 - -2.4
640,611 - 13761 mRNA_5393 0.11 0.9
640,611 - 13761 mRNA_5393 0.11 0.5
640,620 - 13761 mRNA_5393 0.12 1.3
640,680 - 13761 mRNA_5393 0.19 -1.0
640,820 - 13761 mRNA_5393 0.34 -0.8
640,821 - 13761 mRNA_5393 0.34 -1.5
640,839 - 13761 mRNA_5393 0.36 -0.4
640,844 - 13761 mRNA_5393 0.36 -0.3
640,884 - 13761 mRNA_5393 0.41 0.9
640,899 + 13761 mRNA_5393 0.42 0.4
640,933 - 13761 mRNA_5393 0.46 -1.6
640,965 - 13761 mRNA_5393 0.49 1.8
640,980 - 13761 mRNA_5393 0.51 -1.6
640,986 + 13761 mRNA_5393 0.52 0.3
640,996 + 13761 mRNA_5393 0.53 1.1
641,085 - 13761 mRNA_5393 0.62 2.0
641,090 - 13761 mRNA_5393 0.63 3.5
641,126 - 13761 mRNA_5393 0.67 1.8
641,147 + 13761 mRNA_5393 0.69 -0.4
641,148 - 13761 mRNA_5393 0.69 0.6
641,169 - 13761 mRNA_5393 0.71 0.6
641,172 - 13761 mRNA_5393 0.72 0.4
641,172 + 13761 mRNA_5393 0.72 -0.5
641,179 + 13761 mRNA_5393 0.72 1.5
641,179 + 13761 mRNA_5393 0.72 -0.5
641,211 - 13761 mRNA_5393 0.76 0.1
641,218 - 13761 mRNA_5393 0.77 0.3
641,223 - 13761 mRNA_5393 0.77 0.5
641,231 - 13761 mRNA_5393 0.78 0.1
641,256 - 13761 mRNA_5393 0.81 3.3
641,276 - 13761 mRNA_5393 0.83 -0.2
641,288 - 13761 mRNA_5393 0.84 0.1
641,288 - 13761 mRNA_5393 0.84 -1.1
641,289 - 13761 mRNA_5393 0.84 -1.4
641,289 - 13761 mRNA_5393 0.84 1.7
641,290 - 13761 mRNA_5393 0.84 -0.2
641,299 - 13761 mRNA_5393 0.85 -1.0
641,323 - 13761 mRNA_5393 0.88 2.4
641,374 - -0.3
641,375 - -1.7
641,378 - 0.7
641,379 - 0.6
641,384 - -0.1
641,385 - 0.7
641,409 - -0.1
641,417 - 0.2
641,418 - -1.1
641,420 + 1.8
641,422 + 0.4
641,428 + 0.8
641,428 + 0.5
641,428 + -0.2
641,428 + -2.4
641,428 + 1.4
641,429 + 0.5
641,429 - 0.8
641,430 + -0.6
641,431 + -0.5
641,431 + -1.6
641,431 + 0.3
641,431 - 1.9
641,431 - -0.4
641,432 + -1.1
641,432 + 0.8
641,432 - 0.5
641,432 + 1.8
641,433 - 0.1
641,433 - 0.4
641,433 + 2.3
641,433 + -2.0
641,434 + 1.5
641,435 + 2.4
641,435 + 1.4
641,435 + -1.9
641,436 + 1.1
641,436 + -0.5
641,436 + 2.2
641,436 + -0.1
641,436 + -1.5
641,436 + 3.2
641,436 + 1.0
641,436 + -1.2
641,437 + -1.6
641,438 + -0.9
641,439 - -0.2
641,439 - 2.6
641,440 - -0.8
641,441 - 0.7
641,442 - 1.9
641,444 - -0.5
641,445 - -0.1
641,447 - 2.5
641,454 - 2.5