Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5384

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5384: 13752 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 614894 to 615202 13752

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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613,902 - -0.6
614,024 - -0.1
614,117 + 1.1
614,135 - 0.9
614,386 - 1.2
614,714 - 2.0
614,763 - -0.5
614,772 + -0.1
614,788 - -0.4
614,884 - 1.5
614,895 + -0.2
614,932 + 13752 mRNA_5384 0.12 0.1
615,054 - 13752 mRNA_5384 0.52 -0.5
615,067 + 13752 mRNA_5384 0.56 2.2
615,178 - 0.0
615,219 + 1.3
615,339 - 2.4
615,354 + 0.6
615,355 + -0.2
615,358 - -0.6
615,365 + 0.3
615,367 + -0.8
615,371 + 1.1
615,379 + -0.5
615,384 + 0.8
615,389 + -0.1
615,433 - 0.4
615,515 - -1.9
615,533 + 1.2
615,533 - 1.0
615,537 - 0.0
615,541 - -0.5
615,551 - 0.1
615,552 - 0.9
615,566 - 0.4
615,675 - -0.2
615,724 - 0.0
615,751 - 0.2
615,763 + -0.1
615,816 + -0.3
615,841 - -1.7
615,853 + 0.4
615,869 - 1.7
615,935 + 2.7
615,945 + 0.3
615,949 + 0.0
615,949 + -0.1
615,955 + 0.9
615,966 - 2.4
615,990 - 0.4
616,045 + -0.4
616,064 - 0.1
616,072 - -0.3
616,079 - 0.2
616,084 + -1.3
616,092 - 1.7
616,102 - -0.1
616,103 - -0.7
616,106 - 1.7
616,113 - 0.2
616,149 - 1.0
616,153 - 1.6