Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5355

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5354: 13722 - KOG0557 Dihydrolipoamide acetyltransferase, at 527210 to 528729 13722 mRNA_5355: 13723 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 528970 to 530546 13723 mRNA_5356: 13724 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 531177 to 533794 13724

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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528,000 + 13722 mRNA_5354 0.52 1.6
528,752 + -2.5
528,869 + 1.7
529,164 - 13723 mRNA_5355 0.12 1.5
529,225 + 13723 mRNA_5355 0.16 1.3
529,473 - 13723 mRNA_5355 0.32 1.8
529,633 - 13723 mRNA_5355 0.42 -1.1
530,182 - 13723 mRNA_5355 0.77 -0.1
530,668 + 0.8
530,818 - -0.1
530,938 + -1.6
530,956 - 2.1
531,075 + 0.4
531,106 + -0.8