Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5354

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5354: 13722 - KOG0557 Dihydrolipoamide acetyltransferase, at 527210 to 528729 13722 mRNA_5355: 13723 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 528970 to 530546 13723

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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526,243 + 2.2
526,251 - 0.4
526,285 - 0.8
526,439 + 1.2
526,973 - -0.7
526,978 - 0.7
527,080 - 0.1
527,122 - 0.6
527,125 + 0.4
527,128 - -0.6
527,143 + 1.6
527,159 - -0.5
527,429 + 13722 mRNA_5354 0.14 0.2
528,000 + 13722 mRNA_5354 0.52 1.6
528,752 + -2.5
528,869 + 1.7
529,164 - 13723 mRNA_5355 0.12 1.5
529,225 + 13723 mRNA_5355 0.16 1.3
529,473 - 13723 mRNA_5355 0.32 1.8
529,633 - 13723 mRNA_5355 0.42 -1.1