Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5348

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5348: 13716 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 512540 to 514284 13716 mRNA_5349: 13717 - K17427 MRPL46 large subunit ribosomal protein L46, at 514418 to 515269 13717

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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511,628 - 0.3
511,643 + -0.3
511,906 - -1.0
511,914 + 0.1
512,063 + 0.9
512,192 - 0.6
512,359 - -0.7
512,521 - 0.9
512,580 - 0.2
512,613 - -0.1
512,636 + -0.3
512,767 - 13716 mRNA_5348 0.13 0.4
512,785 - 13716 mRNA_5348 0.14 2.7
512,790 + 13716 mRNA_5348 0.14 2.0
512,822 + 13716 mRNA_5348 0.16 2.5
513,049 - 13716 mRNA_5348 0.29 1.0
513,456 - 13716 mRNA_5348 0.52 -0.2
513,505 + 13716 mRNA_5348 0.55 1.1
513,525 - 13716 mRNA_5348 0.56 -0.4
513,636 + 13716 mRNA_5348 0.63 0.3
513,755 - 13716 mRNA_5348 0.70 -1.5
514,183 + 1.1
514,183 + -0.1
514,209 + -1.6
514,298 + 0.7
514,322 - -0.0