Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5334

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5333: 13701 - ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065, at 478191 to 479250 13701 mRNA_5334: 13702 - K14563 NOP1, FBL rRNA 2'-O-methyltransferase fibrillarin, at 479497 to 481330 13702 mRNA_5335: 13703 - HMMPfam-Domain of unknown function (DUF4202)-PF13875, at 481630 to 482657 13703

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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478,546 - 13701 mRNA_5333 0.33 1.3
478,557 - 13701 mRNA_5333 0.35 -1.0
478,564 + 13701 mRNA_5333 0.35 1.1
478,870 - 13701 mRNA_5333 0.64 0.1
478,897 - 13701 mRNA_5333 0.67 2.4
478,904 + 13701 mRNA_5333 0.67 -0.5
478,979 - 13701 mRNA_5333 0.74 0.4
479,041 - 13701 mRNA_5333 0.80 0.2
479,981 + 13702 mRNA_5334 0.26 1.7
481,414 + -0.5
481,462 + 1.4
481,532 - 0.2
481,540 + 1.6
481,564 + -0.6
481,703 + -1.1
481,703 + 0.3
481,742 - 13703 mRNA_5335 0.11 -0.4
481,955 + 13703 mRNA_5335 0.32 -0.0
482,031 - 13703 mRNA_5335 0.39 -2.8