Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5327

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5326: 13694 - K00020 mmsB, HIBADH 3-hydroxyisobutyrate dehydrogenase, at 461748 to 463259 13694 mRNA_5327: 13695 - Hypothetical Protein, at 463511 to 464845 13695 mRNA_5328: 13696 - HMMPfam-ATP adenylyltransferase-PF09830,SUPERFAMILY--SSF54197, at 465608 to 466886 13696

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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462,537 - 13694 mRNA_5326 0.52 0.1
462,709 + 13694 mRNA_5326 0.64 -0.0
462,803 + 13694 mRNA_5326 0.70 -0.2
462,828 + 13694 mRNA_5326 0.71 -0.2
462,853 - 13694 mRNA_5326 0.73 0.0
462,965 - 13694 mRNA_5326 0.80 -0.4
462,999 + 13694 mRNA_5326 0.83 0.8
463,017 + 13694 mRNA_5326 0.84 1.0
463,094 - 13694 mRNA_5326 0.89 0.2
463,135 + -0.2
463,292 - -1.3
463,309 - -0.2
463,336 - -0.5
463,478 + -1.9
463,501 - -0.2
463,602 + 1.0
463,627 + 0.0
463,790 + 13695 mRNA_5327 0.21 1.4
464,013 + 13695 mRNA_5327 0.38 1.9
464,163 - 13695 mRNA_5327 0.49 -0.6
464,642 - 13695 mRNA_5327 0.85 2.1
464,673 - 13695 mRNA_5327 0.87 -0.0
464,954 - -0.3
464,956 + -0.9
464,969 + -0.5
464,977 - -0.2
465,122 + 0.2
465,125 + -0.5
465,129 - 0.4
465,132 + -1.3
465,252 + 0.8
465,267 + 0.6
465,281 - -0.4
465,292 - 1.1
465,300 - 0.9
465,408 - 0.8
465,417 + 1.6
465,418 + -0.5
465,451 - -1.3
465,584 + 0.3
465,590 + 0.9
465,607 + 1.2
465,619 + 1.6