Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5324

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5323: 13691 - K10842 MNAT1 CDK-activating kinase assembly factor MAT1, at 456066 to 457717 13691 mRNA_5324: 13692 - KOG2852 Possible oxidoreductase, at 457858 to 459287 13692 mRNA_5325: 13693 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF52266, at 459771 to 461459 13693

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
457,759 + 0.2
457,780 - -1.3
457,784 - -1.0
457,785 - -2.3
457,798 + 0.5
457,887 + 1.8
457,929 - 0.8
458,084 + 13692 mRNA_5324 0.16 0.4
458,116 + 13692 mRNA_5324 0.18 2.3
458,324 + 13692 mRNA_5324 0.33 0.9
458,535 - 13692 mRNA_5324 0.47 1.2
458,668 + 13692 mRNA_5324 0.57 0.9
458,698 - 13692 mRNA_5324 0.59 -0.2
459,022 - 13692 mRNA_5324 0.81 -0.5
459,238 - -0.7
459,242 - -0.6
459,246 + 1.3
459,519 + -0.2
459,546 + -1.3
459,640 + 0.9
459,661 + 0.0
459,669 - 1.4
459,793 - 0.2
459,842 + 0.4
459,988 - 13693 mRNA_5325 0.13 -1.1
460,136 + 13693 mRNA_5325 0.22 -0.8
460,139 - 13693 mRNA_5325 0.22 0.6
460,139 - 13693 mRNA_5325 0.22 -0.2
460,234 - 13693 mRNA_5325 0.27 1.7