Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5314

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5313: 13681 - KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15, at 430404 to 433324 13681 mRNA_5314: 13682 - Hypothetical Protein, at 433901 to 435484 13682 mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436318 to 439528 13683

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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433,261 + -0.0
433,266 + -0.2
433,367 + -1.9
433,507 + 0.9
433,538 + 0.4
433,664 - -0.0
433,732 + 3.1
433,799 - 1.5
433,815 - 0.9
433,988 + 1.9
434,102 - 13682 mRNA_5314 0.13 -0.1
434,108 - 13682 mRNA_5314 0.13 1.3
434,127 + 13682 mRNA_5314 0.14 -0.7
434,129 - 13682 mRNA_5314 0.14 1.7
434,154 + 13682 mRNA_5314 0.16 0.2
434,232 + 13682 mRNA_5314 0.21 -1.7
434,238 + 13682 mRNA_5314 0.21 -1.5
434,245 + 13682 mRNA_5314 0.22 0.6
434,266 - 13682 mRNA_5314 0.23 0.2
434,368 + 13682 mRNA_5314 0.29 2.4
434,501 + 13682 mRNA_5314 0.38 1.3
434,724 + 13682 mRNA_5314 0.52 -0.2
434,805 + 13682 mRNA_5314 0.57 1.5
434,825 + 13682 mRNA_5314 0.58 -1.3
434,841 - 13682 mRNA_5314 0.59 0.0
434,856 - 13682 mRNA_5314 0.60 0.6
435,279 + 13682 mRNA_5314 0.87 -0.6
435,296 - 13682 mRNA_5314 0.88 -0.6
435,449 - -0.4
435,453 + -0.8
435,456 - 2.5
435,469 + -1.0
435,755 - -0.8
435,848 - -0.1
435,903 - -2.1
436,185 - 2.1