Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5297

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5296: 13664 - Hypothetical Protein, at 382436 to 382844 13664 mRNA_5297: 13665 - Hypothetical Protein, at 383150 to 384089 13665

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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382,205 - -0.1
382,232 + -0.5
382,255 - -0.3
382,276 - 0.8
382,281 + 0.7
382,353 - -0.3
382,354 + -1.2
382,379 + 2.3
382,386 + -0.7
382,561 + 13664 mRNA_5296 0.31 0.9
382,614 + 13664 mRNA_5296 0.44 0.2
382,638 - 13664 mRNA_5296 0.49 0.9
382,656 + 13664 mRNA_5296 0.54 2.7
382,747 + 13664 mRNA_5296 0.76 0.5
382,809 - 0.2
382,812 - -0.0
382,813 + 0.6
382,814 - 0.8
382,823 - -2.8
382,823 - 1.1
382,824 - 0.3
382,848 - -0.5
382,864 - -0.2
382,869 + -0.5
382,874 - 0.0
382,879 + -0.3
382,882 - 1.3
382,883 + 0.5
382,885 - 2.1
382,907 - -0.2
382,911 + 0.9
382,912 - -0.7
382,921 + 1.2
382,961 - 1.7
382,973 - 1.9
383,002 + 0.1
383,003 - -0.0
383,033 - -0.2
383,047 - 0.3
383,051 - 1.8
383,066 + 0.1
383,067 + 1.2
383,074 - -0.0
383,085 - 0.5
383,097 - -2.1
383,099 - 0.5
383,114 - 2.4
383,134 + 1.9
383,138 + 0.7
383,146 - 0.3
383,156 + -1.9
383,162 - -1.3
383,163 - -0.4
383,164 + 0.3
383,165 - 0.1
383,195 - 4.2
383,198 + 1.8
383,204 - 0.2
383,212 - -0.5
383,223 - -0.6
383,266 + 13665 mRNA_5297 0.12 0.7
383,276 - 13665 mRNA_5297 0.13 1.3
383,370 - 13665 mRNA_5297 0.23 0.4
383,377 - 13665 mRNA_5297 0.24 2.7
383,384 + 13665 mRNA_5297 0.25 0.6
383,416 - 13665 mRNA_5297 0.28 -0.4
383,417 + 13665 mRNA_5297 0.28 -0.3
383,423 + 13665 mRNA_5297 0.29 -1.7
383,430 + 13665 mRNA_5297 0.30 0.3
383,535 + 13665 mRNA_5297 0.41 0.6
383,543 - 13665 mRNA_5297 0.42 0.2
383,707 + 13665 mRNA_5297 0.59 1.2
383,728 + 13665 mRNA_5297 0.61 3.3
383,745 + 13665 mRNA_5297 0.63 0.9
383,861 + 13665 mRNA_5297 0.76 0.7
383,969 - 13665 mRNA_5297 0.87 -0.6
384,018 + 0.3
384,173 - -0.7
384,184 + -0.1
384,198 - -0.1
384,272 - -0.3
384,292 - 0.4
384,294 - -0.4
384,296 - 1.0
384,306 + 0.3
384,340 - 1.2
384,343 + -0.7
384,345 - 1.2
384,347 - 0.0
384,350 - -1.8
384,353 - 3.0
384,353 + -0.9
384,355 - 0.0
384,355 - 0.9
384,359 + 2.3
384,372 - 2.7
384,377 + -0.1
384,378 + 0.1
384,379 + 0.2
384,379 - -1.0
384,383 + 1.3
384,391 + 0.3
384,398 + 1.7
384,419 - -0.4
384,430 - 0.8
384,435 - 1.7
384,463 + -1.5
384,463 + 1.4
384,465 - -1.3
384,489 - 0.1
384,652 + 1.3
384,763 + 0.3
384,999 - 0.2