Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5294

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5293: 13661 - Hypothetical Protein, at 373499 to 378247 13661 mRNA_5294: 13662 - K02830 HRAD1, RAD17 cell cycle checkpoint protein, at 378624 to 380568 13662 mRNA_5295: 13663 - Hypothetical Protein, at 381073 to 381951 13663

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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377,627 - 13661 mRNA_5293 0.87 0.6
377,705 + 13661 mRNA_5293 0.89 0.1
378,003 - -0.9
378,022 - -0.6
378,061 + 0.6
378,130 + 2.4
378,151 + 1.0
378,307 - 1.6
378,334 + 1.6
378,459 + -0.2
378,509 - 1.1
378,704 - -0.3
378,738 - -0.7
379,036 - 13662 mRNA_5294 0.21 0.5
379,054 - 13662 mRNA_5294 0.22 0.2
379,059 + 13662 mRNA_5294 0.22 -0.9
379,162 + 13662 mRNA_5294 0.28 -1.3
379,179 + 13662 mRNA_5294 0.29 0.3
379,748 + 13662 mRNA_5294 0.58 -0.3
380,611 - 0.8
380,644 - -0.2
380,665 + 0.5
380,668 + -1.9
380,782 - -0.2
380,929 - 1.3
380,939 - -0.3
380,949 + -1.0
380,996 - -1.1
381,182 - 13663 mRNA_5295 0.12 2.9