Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5284

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5284: 13652 - Hypothetical Protein, at 356424 to 357463 13652 mRNA_5285: 13653 - HMMPfam-FAD binding domain-PF01494,PRINTS-Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature-PR00420,SUPERFAMILY--SSF51905, at 358182 to 359480 13653

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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355,621 - -0.8
355,748 - -0.0
355,759 - -2.1
355,761 + 0.1
355,872 - 0.5
356,174 + -0.6
356,204 + 0.5
356,342 + -0.2
356,342 + 0.9
356,356 + 1.0
356,497 - -0.3
356,656 - 13652 mRNA_5284 0.22 0.2
357,003 + 13652 mRNA_5284 0.56 0.5
357,068 + 13652 mRNA_5284 0.62 1.0
357,097 - 13652 mRNA_5284 0.65 2.4
357,524 - -0.3
357,527 + 1.7
357,573 - 0.8
357,681 - 0.6
357,692 + 0.0
357,830 - -0.3
357,844 + 2.4
357,976 + 1.0
358,113 + -2.6
358,130 - 1.5
358,243 - 0.7
358,270 - 0.9
358,318 + 13653 mRNA_5285 0.10 1.0
358,442 + 13653 mRNA_5285 0.20 1.1