Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5281

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5280: 13648 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 348551 to 349893 13648 mRNA_5281: 13649 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 350665 to 352490 13649 mRNA_5282: 13650 - Hypothetical Protein, at 352780 to 353603 13650

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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349,764 + 0.1
349,799 - -0.4
349,802 - 0.0
349,802 + -1.7
349,864 + 0.9
350,002 + -0.1
350,007 + 0.4
350,079 - -1.0
350,110 + 1.7
350,118 + -0.2
350,173 - -1.1
350,177 + 1.2
350,264 - -0.1
350,269 + 0.8
350,269 - -0.9
350,275 - -0.1
350,278 + 0.4
350,283 + 0.3
350,290 - 1.0
350,302 + 0.2
350,430 - 0.4
350,474 + 0.1
350,565 - -0.2
350,647 + -2.0
350,650 - -0.5
350,651 + 0.2
351,010 - 13649 mRNA_5281 0.19 -0.3
351,384 + 13649 mRNA_5281 0.39 -1.1
351,446 - 13649 mRNA_5281 0.43 1.0
351,448 + 13649 mRNA_5281 0.43 0.3
351,453 - 13649 mRNA_5281 0.43 0.3
351,461 - 13649 mRNA_5281 0.44 0.7
351,466 + 13649 mRNA_5281 0.44 1.5
351,467 - 13649 mRNA_5281 0.44 2.4
351,475 - 13649 mRNA_5281 0.44 -0.0
351,480 + 13649 mRNA_5281 0.45 -0.5
351,543 + 13649 mRNA_5281 0.48 0.4
351,579 - 13649 mRNA_5281 0.50 0.0
351,588 - 13649 mRNA_5281 0.51 3.1
351,591 - 13649 mRNA_5281 0.51 0.5
351,621 + 13649 mRNA_5281 0.52 1.2
351,857 + 13649 mRNA_5281 0.65 0.1
351,937 + 13649 mRNA_5281 0.70 0.9
352,592 + -2.0