Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5270

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5270: 13638 - Hypothetical Protein, at 326289 to 326690 13638 mRNA_5271: 13639 - K11841 USP10, UBP3 ubiquitin carboxyl-terminal hydrolase 10, at 327225 to 330329 13639

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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325,359 + 0.7
325,477 - -1.5
325,479 - -0.9
325,490 - 0.4
325,506 + -2.4
325,543 + -1.4
325,768 + 1.9
326,340 + 13638 mRNA_5270 0.13 0.6
326,342 - 13638 mRNA_5270 0.13 0.5
326,345 - 13638 mRNA_5270 0.14 -2.5
326,481 + 13638 mRNA_5270 0.48 -0.4
326,644 + 13638 mRNA_5270 0.88 -0.5
326,646 - 13638 mRNA_5270 0.89 -1.0
326,656 - 0.2
326,657 + 0.7
326,660 + -0.2
326,688 - -0.3
326,694 + 0.5
326,708 + -0.5
326,713 - 0.6
326,724 + 0.4
326,732 - 0.2
326,803 + -0.4
326,806 + 0.2
326,838 + 2.6
326,878 + 0.5
326,884 + -0.2
326,885 + -0.5
327,010 - -0.5
327,011 - 1.5
327,065 + 0.1
327,111 - 1.2
327,420 - 0.1
327,443 + -0.3