Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5269

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5268: 13636 - K10389 TUBG tubulin gamma, at 319582 to 321853 13636 mRNA_5269: 13637 - K03320 amt, AMT, MEP ammonium transporter, Amt family, at 322459 to 324944 13637

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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321,861 - 0.1
322,020 + -0.6
322,172 + -0.5
322,177 + 2.1
322,208 - -0.3
322,212 - 0.3
322,213 - -0.4
322,217 - 1.2
322,221 + -0.3
322,221 + -0.1
322,222 + 0.4
322,222 - -0.8
322,222 + 0.5
322,232 + 0.8
322,243 + 0.2
322,254 + -0.6
322,361 - 0.9
322,377 - -0.1
322,407 + 1.4
322,525 - -0.4
322,533 - -0.5
322,656 + 4.4
322,836 + 13637 mRNA_5269 0.15 1.4
322,980 + 13637 mRNA_5269 0.21 -0.5
322,992 - 13637 mRNA_5269 0.21 0.9
323,003 - 13637 mRNA_5269 0.22 2.4
323,010 + 13637 mRNA_5269 0.22 0.0
323,120 + 13637 mRNA_5269 0.27 -0.5
323,417 + 13637 mRNA_5269 0.39 -0.2
323,429 + 13637 mRNA_5269 0.39 1.1
323,559 + 13637 mRNA_5269 0.44 -0.2
323,688 + 13637 mRNA_5269 0.49 -0.4
324,146 - 13637 mRNA_5269 0.68 1.5
324,749 + -1.9
325,073 + 2.1
325,359 + 0.7
325,477 - -1.5
325,479 - -0.9
325,490 - 0.4
325,506 + -2.4
325,543 + -1.4
325,768 + 1.9