Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5243

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5243: 13611 - KOG1601 GATA-4/5/6 transcription factors, at 247199 to 251043 13611 mRNA_5244: 13612 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 251965 to 253364 13612

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
246,283 - 2.6
246,293 + -1.3
246,297 + -0.0
246,306 + -0.5
246,447 + 1.2
246,451 + 0.2
246,459 + 0.8
246,477 + 0.8
246,597 - -0.5
246,601 + -0.0
246,608 + -0.0
246,612 - 0.7
246,613 + -0.9
246,613 - 0.2
246,614 + 0.4
246,626 - 0.8
246,630 + -0.3
246,631 - 0.3
246,634 + -0.3
246,636 + 2.3
246,664 + 1.0
246,677 - 1.5
246,719 - 0.1
246,729 + -1.6
246,734 - 0.5
246,736 + -0.3
246,736 + 0.6
246,742 - 0.2
246,750 + -1.2
246,752 + -0.2
246,757 + 0.2
246,878 + -2.0
246,934 + 1.4
246,936 + 0.4
246,957 + -0.3
246,957 - 0.3
246,960 + 0.6
246,961 - 0.1
246,961 + -1.2
246,962 - 1.9
246,963 + -2.1
246,966 + -0.4
246,970 - -0.6
246,971 - 1.8
246,974 - 0.5
246,976 + 0.9
246,984 + 0.7
246,986 - -0.4
246,987 + -0.6
246,988 - -2.6
246,993 + 1.6
246,998 + 0.3
247,082 - -1.3
247,144 + -0.0
247,274 + -0.2
247,287 + -0.6
247,287 + 0.2
247,293 + 1.0
247,426 + -0.0
247,437 - 1.8
247,447 - 3.1
247,574 + 0.3
247,705 + 13611 mRNA_5243 0.13 2.0
248,025 + 13611 mRNA_5243 0.21 -0.8
248,229 - 13611 mRNA_5243 0.27 0.8
248,275 - 13611 mRNA_5243 0.28 1.5
248,450 + 13611 mRNA_5243 0.33 0.2
248,569 + 13611 mRNA_5243 0.36 0.7
248,876 + 13611 mRNA_5243 0.44 -2.7
248,906 + 13611 mRNA_5243 0.44 0.0
249,144 - 13611 mRNA_5243 0.51 0.6
249,180 + 13611 mRNA_5243 0.52 -0.2
249,324 - 13611 mRNA_5243 0.55 -0.0
249,768 + 13611 mRNA_5243 0.67 -1.6
250,029 - 13611 mRNA_5243 0.74 -0.2
250,367 + 13611 mRNA_5243 0.82 0.4
250,466 - 13611 mRNA_5243 0.85 0.1
250,902 - -0.1
251,028 - 1.6
251,062 - -0.9
251,190 - 0.0
251,197 - 2.0
251,216 - -1.2
251,218 + -0.7
251,225 - 0.4
251,231 + 2.2
251,233 - 0.3
251,241 + 1.2
251,351 + 0.6
251,354 - 1.5
251,356 - 1.1
251,356 - -1.5
251,365 - -0.7
251,366 + 1.4
251,368 + 1.2
251,369 - -0.4
251,372 + 0.9
251,372 - -1.4
251,373 + -0.0
251,375 - -1.6
251,388 + -0.3
251,392 + -1.2
251,397 - 0.7
251,412 - 1.2
251,414 + -1.9
251,421 - -0.3
251,423 - -2.8
251,425 + -0.2
251,528 + 0.7
251,535 + -0.5
251,537 - 0.8
251,553 + -0.5
251,560 - 1.0
251,561 - 2.1
251,681 + 1.3
251,685 + -1.7
251,702 + -0.9
251,719 + 0.9
251,753 + 1.2
251,755 - 1.2
251,810 - 0.8
251,827 - 0.3
251,835 + -0.2