Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5223

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5222: 13590 - Hypothetical Protein, at 187738 to 188641 13590 mRNA_5223: 13591 - Hypothetical Protein, at 189064 to 190572 13591 mRNA_5224: 13592 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 190897 to 192363 13592

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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188,189 + 13590 mRNA_5222 0.50 2.1
188,435 + 13590 mRNA_5222 0.77 3.4
188,604 - 3.0
188,663 + -0.5
188,901 + 0.6
188,973 - 0.3
189,016 - 1.0
189,038 + 1.8
189,041 + 0.2
189,046 - 0.5
189,048 + -1.4
189,227 + 13591 mRNA_5223 0.11 -0.6
189,379 + 13591 mRNA_5223 0.21 -0.6
189,453 - 13591 mRNA_5223 0.26 1.5
189,475 - 13591 mRNA_5223 0.27 -1.9
189,490 + 13591 mRNA_5223 0.28 -0.5
189,620 - 13591 mRNA_5223 0.37 -0.9
189,721 + 13591 mRNA_5223 0.44 0.2
189,759 - 13591 mRNA_5223 0.46 -0.4
189,871 + 13591 mRNA_5223 0.53 0.8
189,876 - 13591 mRNA_5223 0.54 -0.0
189,892 - 13591 mRNA_5223 0.55 0.1
189,895 + 13591 mRNA_5223 0.55 0.9
190,047 - 13591 mRNA_5223 0.65 0.6
190,069 + 13591 mRNA_5223 0.67 3.7
190,327 - 13591 mRNA_5223 0.84 1.0
190,343 + 13591 mRNA_5223 0.85 -2.0
190,385 - 13591 mRNA_5223 0.88 -0.5
190,385 - 13591 mRNA_5223 0.88 1.1
190,403 - 13591 mRNA_5223 0.89 0.7
190,765 - -1.6
190,771 - -0.6
190,781 - 2.1
190,879 + 0.2
190,941 - 0.7
190,943 + -0.5
190,960 + -0.8
191,055 + 13592 mRNA_5224 0.11 0.5
191,086 + 13592 mRNA_5224 0.13 -0.3
191,096 - 13592 mRNA_5224 0.14 0.1
191,104 - 13592 mRNA_5224 0.14 1.5
191,117 + 13592 mRNA_5224 0.15 0.2
191,197 + 13592 mRNA_5224 0.20 0.5
191,232 - 13592 mRNA_5224 0.23 -0.4
191,266 + 13592 mRNA_5224 0.25 2.1
191,282 + 13592 mRNA_5224 0.26 0.6