Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5217

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5215: 13583 - KOG1940 Zn-finger protein, at 166614 to 167435 13583 mRNA_5217: 13585 - Hypothetical Protein, at 167751 to 168514 13585 mRNA_5216: 13584 - K04648 DCTN1 dynactin 1, at 169213 to 174465 13584

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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166,755 + 13583 mRNA_5215 0.17 0.3
167,243 + 13583 mRNA_5215 0.77 0.6
167,536 - -0.3
167,984 + 13585 mRNA_5217 0.30 1.2
168,036 + 13585 mRNA_5217 0.37 0.3
168,141 - 13585 mRNA_5217 0.51 1.7
168,170 - 13585 mRNA_5217 0.55 2.1
168,417 - 13585 mRNA_5217 0.87 -0.8
168,429 - 13585 mRNA_5217 0.89 1.5
168,740 + 0.2
168,816 + 1.5
168,905 - 0.4
168,909 - 0.9
169,361 + 0.6
169,364 - 1.0