Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5214

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5213: 13581 - Hypothetical Protein, at 163193 to 164200 13581 mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164395 to 166467 13582 mRNA_5215: 13583 - KOG1940 Zn-finger protein, at 166614 to 167435 13583

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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163,453 - 13581 mRNA_5213 0.26 -0.6
163,668 + 13581 mRNA_5213 0.47 -0.8
163,734 + 13581 mRNA_5213 0.54 -0.2
163,948 + 13581 mRNA_5213 0.75 0.5
163,995 + 13581 mRNA_5213 0.80 -0.8
164,058 + 13581 mRNA_5213 0.86 1.0
164,492 - 0.1
164,788 + 13582 mRNA_5214 0.19 1.4
164,857 - 13582 mRNA_5214 0.22 1.7
164,941 - 13582 mRNA_5214 0.26 0.2
164,967 - 13582 mRNA_5214 0.28 -0.2
164,995 + 13582 mRNA_5214 0.29 2.2
165,243 - 13582 mRNA_5214 0.41 -0.3
165,701 - 13582 mRNA_5214 0.63 0.8
165,858 + 13582 mRNA_5214 0.71 -0.6
165,948 + 13582 mRNA_5214 0.75 -0.3
166,072 + 13582 mRNA_5214 0.81 2.0
166,118 - 13582 mRNA_5214 0.83 -0.2
166,235 + 13582 mRNA_5214 0.89 0.9
166,253 - 13582 mRNA_5214 0.90 1.1
166,276 - -0.6
166,355 + 0.4
166,394 + 0.3
166,407 + -0.6
166,408 + 2.3
166,755 + 13583 mRNA_5215 0.17 0.3
167,243 + 13583 mRNA_5215 0.77 0.6