Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5174

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5174: 13542 - Hypothetical Protein, at 77954 to 78191 13542 mRNA_5175: 13543 - K08341 GABARAP, ATG8, LC3 GABA(A) receptor-associated protein, at 78484 to 79264 13543

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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77,225 + 1.6
77,231 + -0.2
77,385 + 2.2
77,395 - -0.2
77,403 - 0.6
77,421 - 0.4
77,423 - 0.5
77,424 + -0.5
77,683 - -0.4
77,836 + -0.1
77,995 - 13542 mRNA_5174 0.17 0.6
78,115 + 13542 mRNA_5174 0.68 1.4
78,260 + -0.0
78,273 + -1.7
78,307 - 0.3
78,385 - 1.9
78,395 + 0.4
78,403 - -0.3
78,408 - 0.2
78,421 + -1.1
78,586 + 13543 mRNA_5175 0.13 0.8
78,720 - 13543 mRNA_5175 0.30 0.5
78,738 + 13543 mRNA_5175 0.33 0.1
78,878 + 13543 mRNA_5175 0.50 -0.1
79,166 - 13543 mRNA_5175 0.87 0.9