Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5171

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5170: 13538 - Hypothetical Protein, at 64710 to 65306 13538 mRNA_5171: 13539 - KOG2262 Sexual differentiation process protein ISP4, at 65762 to 68577 13539

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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65,233 + 13538 mRNA_5170 0.88 1.6
65,514 + -0.3
65,527 - 1.2
65,611 + 0.9
65,614 + 2.0
65,672 - 0.1
65,673 + 0.6
65,676 + 0.0
65,684 - 1.6
65,691 - -0.4
65,852 + 0.5
65,950 - 1.0
66,256 - 13539 mRNA_5171 0.18 1.4
66,263 - 13539 mRNA_5171 0.18 0.1
67,086 - 13539 mRNA_5171 0.47 1.0
67,136 - 13539 mRNA_5171 0.49 3.2
67,232 + 13539 mRNA_5171 0.52 2.0
67,297 + 13539 mRNA_5171 0.55 0.1
67,351 + 13539 mRNA_5171 0.56 -0.3
67,425 - 13539 mRNA_5171 0.59 2.1
67,425 + 13539 mRNA_5171 0.59 -0.4
67,524 - 13539 mRNA_5171 0.63 1.0
67,701 - 13539 mRNA_5171 0.69 1.2
67,721 + 13539 mRNA_5171 0.70 0.6
67,759 - 13539 mRNA_5171 0.71 0.7
67,891 - 13539 mRNA_5171 0.76 0.5
68,481 + 1.5
68,758 - 1.0
69,026 + 0.5
69,028 - -1.4
69,193 - 0.0
69,193 - -0.3
69,200 + 0.2
69,208 - -0.6
69,327 - -2.0
69,331 - 0.8
69,333 - 0.0
69,337 - 1.0
69,338 + 1.2
69,351 + 0.1
69,355 + 1.8
69,462 - 1.3
69,476 + 0.2
69,499 + 0.3
69,500 - -0.6
69,502 + -0.6
69,503 - 0.7
69,511 + 2.7
69,519 + -0.7