Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5170

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5169: 13537 - Hypothetical Protein, at 62559 to 64260 13537 mRNA_5170: 13538 - Hypothetical Protein, at 64710 to 65306 13538 mRNA_5171: 13539 - KOG2262 Sexual differentiation process protein ISP4, at 65762 to 68577 13539

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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63,720 + 13537 mRNA_5169 0.68 0.1
63,868 + 13537 mRNA_5169 0.77 1.5
63,869 + 13537 mRNA_5169 0.77 2.1
64,004 - 13537 mRNA_5169 0.85 -0.3
64,030 + 13537 mRNA_5169 0.86 0.3
64,030 + 13537 mRNA_5169 0.86 0.1
64,154 - -0.8
64,173 + 1.2
64,180 + -0.6
64,221 + -1.0
64,302 + 0.2
64,315 - -1.3
64,334 - -0.6
64,341 + 0.3
64,343 - -0.4
64,343 + -1.0
64,348 + 0.1
64,358 + -0.1
64,522 + 0.2
65,233 + 13538 mRNA_5170 0.88 1.6
65,514 + -0.3
65,527 - 1.2
65,611 + 0.9
65,614 + 2.0
65,672 - 0.1
65,673 + 0.6
65,676 + 0.0
65,684 - 1.6
65,691 - -0.4
65,852 + 0.5
65,950 - 1.0
66,256 - 13539 mRNA_5171 0.18 1.4
66,263 - 13539 mRNA_5171 0.18 0.1