Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5169

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5168: 13536 - SUPERFAMILY--SSF46955, at 60934 to 62324 13536 mRNA_5169: 13537 - Hypothetical Protein, at 62559 to 64260 13537 mRNA_5170: 13538 - Hypothetical Protein, at 64710 to 65306 13538

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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61,650 + 13536 mRNA_5168 0.51 0.6
61,749 + 13536 mRNA_5168 0.59 0.2
62,410 - 1.9
62,514 + 0.8
62,816 + 13537 mRNA_5169 0.15 1.1
62,855 - 13537 mRNA_5169 0.17 0.4
62,930 + 13537 mRNA_5169 0.22 0.4
62,996 + 13537 mRNA_5169 0.26 -0.0
63,132 + 13537 mRNA_5169 0.34 1.1
63,254 - 13537 mRNA_5169 0.41 -0.4
63,573 - 13537 mRNA_5169 0.60 -3.5
63,720 + 13537 mRNA_5169 0.68 0.1
63,868 + 13537 mRNA_5169 0.77 1.5
63,869 + 13537 mRNA_5169 0.77 2.1
64,004 - 13537 mRNA_5169 0.85 -0.3
64,030 + 13537 mRNA_5169 0.86 0.3
64,030 + 13537 mRNA_5169 0.86 0.1
64,154 - -0.8
64,173 + 1.2
64,180 + -0.6
64,221 + -1.0
64,302 + 0.2
64,315 - -1.3
64,334 - -0.6
64,341 + 0.3
64,343 - -0.4
64,343 + -1.0
64,348 + 0.1
64,358 + -0.1
64,522 + 0.2
65,233 + 13538 mRNA_5170 0.88 1.6