Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5167

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5166: 13534 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 53307 to 58220 13534 mRNA_5167: 13535 - Hypothetical Protein, at 58782 to 59470 13535

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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57,858 - 0.5
57,867 + -0.4
57,896 + 1.7
58,295 - 4.0
58,464 + -0.7
58,586 - 0.8
58,589 - 2.6
58,613 - 1.4
58,633 - 4.2
58,734 + 0.0
59,032 - 13535 mRNA_5167 0.36 1.0
59,174 + 13535 mRNA_5167 0.57 0.3
59,187 + 13535 mRNA_5167 0.59 -0.1
59,189 + 13535 mRNA_5167 0.59 -0.1
59,350 + 13535 mRNA_5167 0.82 -2.0
59,461 + 0.4
59,493 - 0.7
59,495 - -0.1
59,647 - 0.3
59,656 - 0.1
59,658 - 0.7
59,687 - -0.6
59,691 - -0.1
59,723 - 1.0
59,794 - 0.2
59,803 - -0.7
59,955 - -0.2
60,199 - -0.5
60,240 + 2.2
60,250 - -1.0
60,289 + -0.6