Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5142

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5141: 13509 - K12198 CHMP5, VPS60 charged multivesicular body protein 5, at 1 to 752 13509 mRNA_5142: 13510 - K13577 SLC25A10, DIC solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10, at 1705 to 3095 13510

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,004 + -0.5
1,164 + -0.4
1,286 - -0.1
1,299 + -1.7
1,302 - -0.1
1,556 - 0.5
1,774 - 0.5
1,781 + 0.1
1,884 + 13510 mRNA_5142 0.13 1.0
2,003 - 13510 mRNA_5142 0.21 1.3
2,160 - 13510 mRNA_5142 0.33 1.0
2,367 + 13510 mRNA_5142 0.48 -1.8
2,439 - 13510 mRNA_5142 0.53 1.7
2,786 + 13510 mRNA_5142 0.78 -0.3
2,895 + 13510 mRNA_5142 0.86 0.4
3,162 - 0.7
3,478 + -0.2
3,502 + -0.7
3,509 + -0.0
3,622 + 2.7
3,622 + 1.0
3,628 + 0.7
3,641 + 1.7
3,726 - 0.2
3,741 + 0.3
3,765 + 1.5
3,803 + 0.3
4,034 + 0.5