Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5103

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5102: 13470 - KOG0619 FOG Leucine rich repeat, at 1753629 to 1757881 13470 mRNA_5103: 13471 - K03099 SOS son of sevenless, at 1758671 to 1763554 13471 mRNA_5104: 13472 - Hypothetical Protein, at 1764284 to 1764496 13472

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,757,745 - 1.8
1,757,896 + 1.2
1,757,899 - 0.0
1,757,921 - -0.6
1,758,022 - 0.8
1,758,343 + 1.9
1,758,355 - -0.0
1,758,358 + -0.8
1,758,362 - -0.4
1,758,483 + 1.9
1,758,500 - 1.0
1,758,625 - -1.3
1,758,627 + 1.7
1,758,639 + 2.6
1,758,787 - 0.8
1,758,815 + -0.7
1,759,243 + 13471 mRNA_5103 0.12 0.2
1,759,348 - 13471 mRNA_5103 0.14 1.5
1,759,675 - 13471 mRNA_5103 0.21 0.3
1,759,828 + 13471 mRNA_5103 0.24 1.4
1,759,859 - 13471 mRNA_5103 0.24 1.0
1,759,963 + 13471 mRNA_5103 0.26 0.8
1,760,253 - 13471 mRNA_5103 0.32 0.9
1,760,286 - 13471 mRNA_5103 0.33 -0.6
1,760,557 + 13471 mRNA_5103 0.39 -0.1
1,761,000 + 13471 mRNA_5103 0.48 1.5
1,761,143 - 13471 mRNA_5103 0.51 0.2
1,761,276 - 13471 mRNA_5103 0.53 -0.9
1,761,438 - 13471 mRNA_5103 0.57 0.1
1,761,579 - 13471 mRNA_5103 0.60 0.3
1,761,861 - 13471 mRNA_5103 0.65 1.4
1,761,995 - 13471 mRNA_5103 0.68 0.4
1,762,157 - 13471 mRNA_5103 0.71 1.1
1,762,165 - 13471 mRNA_5103 0.72 -0.4
1,762,186 + 13471 mRNA_5103 0.72 -0.4
1,762,198 + 13471 mRNA_5103 0.72 0.8
1,762,323 - 13471 mRNA_5103 0.75 0.6
1,762,416 + 13471 mRNA_5103 0.77 0.1
1,762,858 + 13471 mRNA_5103 0.86 2.3
1,763,733 + 1.9
1,763,784 + -0.9
1,764,053 + -0.2
1,764,383 + 13472 mRNA_5104 0.46 1.4