Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5017

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5016: 13384 - BLAST UPF0643 protein PB2B2.08 [Hypsizygus marmoreus], at 1555727 to 1556735 13384 mRNA_5017: 13385 - K08963 mtnA methylthioribose-1-phosphate isomerase, at 1557007 to 1558590 13385 mRNA_5018: 13386 - Hypothetical Protein, at 1558748 to 1560542 13386

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
1,556,379 - 13384 mRNA_5016 0.65 0.7
1,556,540 + 13384 mRNA_5016 0.81 -0.2
1,556,548 - 13384 mRNA_5016 0.81 2.2
1,556,680 - 0.8
1,556,788 - -0.7
1,556,838 + -1.5
1,556,839 - -0.1
1,556,844 + 1.1
1,556,848 - 0.6
1,556,854 + 0.3
1,556,855 - 1.2
1,556,856 + 0.6
1,556,859 - -0.6
1,556,859 - 0.3
1,557,140 - 0.6
1,557,305 - 13385 mRNA_5017 0.19 -0.2
1,557,421 + 13385 mRNA_5017 0.26 0.9
1,557,743 + 13385 mRNA_5017 0.46 0.8
1,558,015 - 13385 mRNA_5017 0.64 2.4
1,558,020 + 13385 mRNA_5017 0.64 -1.0
1,558,591 + -0.2
1,559,316 + 13386 mRNA_5018 0.32 1.9
1,559,447 - 13386 mRNA_5018 0.39 -0.3