Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4985

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4984: 13352 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784, at 1476412 to 1477119 13352 mRNA_4985: 13353 - BLAST vps9 domain protein [Zymoseptoria brevis], at 1477424 to 1478250 13353 mRNA_4986: 13354 - K17943 PUM pumilio RNA-binding family, at 1478894 to 1482308 13354

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
1,476,442 + 1.3
1,476,782 + 13352 mRNA_4984 0.52 0.2
1,477,001 + 13352 mRNA_4984 0.83 0.4
1,477,033 + 13352 mRNA_4984 0.88 1.0
1,477,123 - 0.7
1,477,134 - -0.2
1,477,135 - -0.2
1,477,135 - -0.5
1,477,143 + 1.7
1,477,143 - 0.4
1,477,167 + 1.2
1,477,167 - 1.2
1,477,177 - -0.1
1,477,196 + -0.7
1,477,255 - -0.4
1,477,337 - 1.6
1,477,351 + 1.8
1,477,356 + 0.2
1,477,471 - -0.4
1,477,494 + -0.8
1,477,625 - 13353 mRNA_4985 0.24 1.2
1,478,095 - 13353 mRNA_4985 0.81 2.4
1,478,185 + -0.0
1,478,219 + 2.2
1,478,384 + -0.6
1,478,820 + 1.1
1,479,043 + 1.5
1,479,118 - 0.0