Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4966

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4965: 13333 - K15156 MED14, RGR1 mediator of RNA polymerase II transcription subunit 14, at 1421714 to 1425387 13333 mRNA_4966: 13334 - Hypothetical Protein, at 1425631 to 1426865 13334 mRNA_4967: 13335 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 1427740 to 1431350 13335

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,424,796 + 13333 mRNA_4965 0.84 1.4
1,425,062 - 1.7
1,426,093 + 13334 mRNA_4966 0.37 1.5
1,426,548 - 13334 mRNA_4966 0.74 0.4
1,426,673 - 13334 mRNA_4966 0.84 3.2
1,426,780 - 0.1
1,426,833 - 0.9
1,426,970 + 0.8
1,427,110 + -0.9
1,427,110 + -0.2
1,427,118 + -2.6
1,427,247 - 0.1
1,427,251 + 0.3
1,427,252 - -1.8
1,427,293 + -0.7
1,427,294 + -0.5
1,427,399 + 1.7
1,427,414 + 0.0
1,427,627 - -1.2
1,427,668 + -1.6
1,427,679 + -0.1
1,427,695 - 0.4
1,427,703 + -0.6
1,427,706 - 0.6
1,427,839 - -1.0
1,427,840 - 2.7
1,427,848 - 1.2
1,427,861 + -0.4