Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4961

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4960: 13328 - K00102 dld, LDHD D-lactate dehydrogenase (cytochrome), at 1410723 to 1413349 13328 mRNA_4961: 13329 - Hypothetical Protein, at 1413701 to 1414806 13329

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,412,970 + 13328 mRNA_4960 0.86 -0.0
1,412,971 - 13328 mRNA_4960 0.86 0.5
1,413,032 - 13328 mRNA_4960 0.88 0.2
1,413,106 - 0.7
1,413,108 - 0.3
1,413,124 - -2.0
1,413,240 - -0.3
1,413,258 + -1.6
1,413,262 + 0.4
1,413,290 - -0.2
1,413,401 + -0.2
1,413,401 - -0.1
1,413,409 + -1.1
1,413,439 - 1.0
1,414,600 - 13329 mRNA_4961 0.81 -2.5
1,414,765 + 0.5
1,415,043 - 0.0
1,415,052 + 0.1