Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4812

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4811: 13179 - Hypothetical Protein, at 1070927 to 1071764 13179 mRNA_4812: 13180 - K15255 PIF1 ATP-dependent DNA helicase PIF1, at 1072334 to 1073346 13180 mRNA_4813: 13181 - Hypothetical Protein, at 1073710 to 1074508 13181

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,071,966 - 0.3
1,072,014 - -0.7
1,072,103 + -0.8
1,072,146 + -2.1
1,072,695 - 13180 mRNA_4812 0.36 2.1
1,072,747 + 13180 mRNA_4812 0.41 1.4
1,073,143 + 13180 mRNA_4812 0.80 0.9
1,073,150 + 13180 mRNA_4812 0.81 1.9
1,073,153 - 13180 mRNA_4812 0.81 -0.6
1,073,344 - -0.5
1,073,406 - -1.0
1,073,432 + -0.4
1,073,461 + 0.2
1,073,943 + 13181 mRNA_4813 0.29 2.1
1,074,173 - 13181 mRNA_4813 0.58 0.6