Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4807

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4806: 13174 - Hypothetical Protein, at 1057204 to 1058778 13174 mRNA_4807: 13175 - K03119 tauD taurine dioxygenase, at 1059105 to 1060772 13175 mRNA_4808: 13176 - K12880 THOC3 THO complex subunit 3, at 1061529 to 1063050 13176

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,058,221 + 13174 mRNA_4806 0.65 0.5
1,058,237 - 13174 mRNA_4806 0.66 1.0
1,058,663 - 0.7
1,058,866 - -0.8
1,058,996 - 0.6
1,060,002 - 13175 mRNA_4807 0.54 0.8
1,060,014 + 13175 mRNA_4807 0.54 1.6
1,060,018 + 13175 mRNA_4807 0.55 2.5
1,060,026 - 13175 mRNA_4807 0.55 3.5
1,060,310 + 13175 mRNA_4807 0.72 0.5
1,060,601 + 13175 mRNA_4807 0.90 1.4
1,060,611 - 1.5
1,061,035 + -0.5
1,061,044 + 0.6
1,061,122 + 0.9
1,061,132 - -0.7
1,061,175 - -0.1
1,061,181 - -2.8
1,061,195 + -0.8
1,061,207 + -0.5
1,061,289 - -0.2
1,061,315 + -0.4
1,061,336 + 0.5
1,061,612 + 0.5