Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4766

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4765: 13133 - SUPERFAMILY--SSF52058, at 958000 to 961527 13133 mRNA_4766: 13134 - BLAST ribonuclease e [Moniliophthora roreri MCA 2997], at 961767 to 963160 13134 mRNA_4767: 13135 - KOG1263 Multicopper oxidases, at 963483 to 966203 13135

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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961,166 - 13133 mRNA_4765 0.90 1.9
961,475 + 0.5
961,563 - 1.6
961,649 + 2.1
961,652 - 0.5
961,909 + 13134 mRNA_4766 0.10 0.2
961,988 - 13134 mRNA_4766 0.16 -0.5
961,988 - 13134 mRNA_4766 0.16 0.3
962,424 - 13134 mRNA_4766 0.47 0.1
962,638 + 13134 mRNA_4766 0.62 0.8
962,672 + 13134 mRNA_4766 0.65 -0.2
962,697 - 13134 mRNA_4766 0.67 0.5
962,778 + 13134 mRNA_4766 0.73 -0.1
962,798 - 13134 mRNA_4766 0.74 0.2
963,076 - 3.5
963,338 - 2.8
963,369 - -1.9
963,735 - -2.0
963,757 + 13135 mRNA_4767 0.10 1.3
964,145 + 13135 mRNA_4767 0.24 1.2