Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4758

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4757: 13125 - Hypothetical Protein, at 937399 to 937793 13125 mRNA_4758: 13126 - HMMPfam-Autophagy-related protein 27-PF09451,SUPERFAMILY--SSF50911, at 938067 to 939280 13126

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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937,144 + 1.1
937,218 - -1.7
937,242 - 0.9
937,534 - 13125 mRNA_4757 0.34 2.5
937,538 + 13125 mRNA_4757 0.35 0.1
937,549 - 13125 mRNA_4757 0.38 3.7
937,550 + 13125 mRNA_4757 0.38 -0.4
937,632 - 13125 mRNA_4757 0.59 0.5
937,689 - 13125 mRNA_4757 0.73 0.1
937,704 + 13125 mRNA_4757 0.77 0.1
937,712 + 13125 mRNA_4757 0.79 0.8
937,729 + 13125 mRNA_4757 0.84 -0.5
937,729 + 13125 mRNA_4757 0.84 4.0
937,736 - 13125 mRNA_4757 0.85 2.2
937,746 + 13125 mRNA_4757 0.88 0.3
937,765 - -0.8
937,768 - 0.7
937,873 - -0.6
937,892 - 1.2
937,897 + 0.3
937,908 + 2.4
937,910 + 0.7
937,918 + 0.9
938,179 + 0.0
938,200 - 13126 mRNA_4758 0.11 0.0
938,207 + 13126 mRNA_4758 0.12 0.8
938,297 - 13126 mRNA_4758 0.19 0.0
938,365 + 13126 mRNA_4758 0.25 -0.1
938,487 - 13126 mRNA_4758 0.35 -1.4
938,694 + 13126 mRNA_4758 0.52 1.7
939,237 - 0.4
939,237 - 0.2
939,247 - 1.6
939,442 + 1.4
939,484 + -1.1
939,543 + 3.2
939,543 + -0.0
939,632 + -0.3
939,839 + 0.2
939,861 + 1.0
940,107 - -0.6
940,231 - 0.1
940,237 - 0.1