Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4751

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4750: 13118 - Hypothetical Protein, at 919411 to 921092 13118 mRNA_4751: 13119 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 921381 to 922742 13119 mRNA_4752: 13120 - KOG1263 Multicopper oxidases, at 922993 to 927297 13120

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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920,913 - 13118 mRNA_4750 0.89 0.3
920,933 - 0.4
920,969 - 0.4
921,040 - 1.9
921,064 - 0.7
921,209 + -0.4
921,260 + 2.3
921,337 + 0.3
921,346 - -0.1
921,372 - -0.9
921,373 + 0.2
921,504 - 0.2
921,518 - 13119 mRNA_4751 0.10 -0.8
921,538 + 13119 mRNA_4751 0.12 0.6
921,583 + 13119 mRNA_4751 0.15 1.3
921,801 + 13119 mRNA_4751 0.31 1.7
921,844 + 13119 mRNA_4751 0.34 0.3
922,065 - 13119 mRNA_4751 0.50 -0.2
922,244 + 13119 mRNA_4751 0.63 0.2
922,295 - 13119 mRNA_4751 0.67 2.4
922,370 + 13119 mRNA_4751 0.73 0.6
922,541 + 13119 mRNA_4751 0.85 1.5
922,542 - 13119 mRNA_4751 0.85 1.0
922,551 - 13119 mRNA_4751 0.86 -0.9
922,585 + 13119 mRNA_4751 0.88 0.4
922,697 + 2.7
923,294 - -0.0
923,310 - 1.6
923,474 + 13120 mRNA_4752 0.11 1.0
923,596 - 13120 mRNA_4752 0.14 0.6
923,728 + 13120 mRNA_4752 0.17 0.9