Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4747

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4746: 13114 - Hypothetical Protein, at 911729 to 913359 13114 mRNA_4747: 13115 - SUPERFAMILY--SSF52047, at 913676 to 915300 13115 mRNA_4748: 13116 - Hypothetical Protein, at 915599 to 917193 13116

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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912,802 - 13114 mRNA_4746 0.66 0.5
912,918 - 13114 mRNA_4746 0.73 -1.5
912,933 + 13114 mRNA_4746 0.74 1.1
912,945 - 13114 mRNA_4746 0.75 0.7
913,311 - -0.7
913,404 + 0.2
913,427 + -1.7
913,549 + 0.2
913,553 - -0.1
913,557 + 0.6
913,567 - 0.6
913,679 - 2.9
913,682 - 0.0
913,700 + 2.8
913,708 + 2.3
913,718 + 1.2
913,722 + 0.1
913,753 - 0.1
913,755 - -2.1
913,762 + 0.3
913,807 + 1.1
913,813 + 0.2
913,816 - -0.6
913,867 - 13115 mRNA_4747 0.12 0.3
913,900 + 13115 mRNA_4747 0.14 0.4
913,965 - 13115 mRNA_4747 0.18 1.8
914,001 - 13115 mRNA_4747 0.20 0.2
914,252 - 13115 mRNA_4747 0.35 -2.2
914,364 - 13115 mRNA_4747 0.42 0.3
914,430 + 13115 mRNA_4747 0.46 1.6
914,465 + 13115 mRNA_4747 0.49 2.4
914,802 - 13115 mRNA_4747 0.69 0.1
914,905 - 13115 mRNA_4747 0.76 1.6
915,182 + -1.7
915,328 + 1.4
915,336 + -0.1
915,469 + 1.2
915,548 - 0.6
915,635 - 1.5
915,651 + -0.6
915,744 - -0.2
915,769 + 13116 mRNA_4748 0.11 2.4
915,772 - 13116 mRNA_4748 0.11 0.4
915,910 - 13116 mRNA_4748 0.19 2.2
915,924 - 13116 mRNA_4748 0.20 1.6
916,109 - 13116 mRNA_4748 0.32 -0.3
916,114 - 13116 mRNA_4748 0.32 0.2
916,115 - 13116 mRNA_4748 0.32 -2.1