Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4740

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4739: 13107 - K06883 K06883 uncharacterized protein, at 893968 to 895440 13107 mRNA_4740: 13108 - Hypothetical Protein, at 896087 to 896524 13108 mRNA_4741: 13109 - KOG2208 Vigilin, at 896784 to 901112 13109

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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895,611 - 0.3
895,611 - 2.3
895,618 + 0.2
895,907 + -0.3
896,044 + 0.4
896,046 - -0.4
896,046 - 3.3
896,055 - 4.1
896,176 - 13108 mRNA_4740 0.20 0.4
896,209 + 13108 mRNA_4740 0.28 0.2
896,302 + 13108 mRNA_4740 0.49 0.0
896,308 + 13108 mRNA_4740 0.50 1.0
896,314 + 13108 mRNA_4740 0.52 1.2
896,424 - 13108 mRNA_4740 0.77 0.7
896,447 + 13108 mRNA_4740 0.82 0.6
896,455 + 13108 mRNA_4740 0.84 0.3
896,456 - 13108 mRNA_4740 0.84 -0.1
896,475 + 13108 mRNA_4740 0.89 2.6
896,510 + 1.1
896,579 - 0.1
896,662 - 0.6
896,752 + -1.4
896,770 - -0.1
896,773 + 1.0
896,788 - -0.2
896,907 - 1.1
896,912 + 1.2
897,050 - 2.0
897,052 + 0.4
897,060 - 0.5
897,066 + 3.9
897,072 + 0.1
897,086 + 2.8
897,181 + 1.9
897,207 - 0.5
897,235 + 13109 mRNA_4741 0.10 0.2
897,339 + 13109 mRNA_4741 0.13 1.7
897,344 - 13109 mRNA_4741 0.13 -0.0
897,393 - 13109 mRNA_4741 0.14 0.8
897,400 + 13109 mRNA_4741 0.14 1.9
897,493 - 13109 mRNA_4741 0.16 0.3